Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015938063.1_cds_XP_016483088.1_74240
CDS Infomation

[gene=LOC107803812] [db_xref=GeneID:107803812] [protein=threonine synthase, chloroplastic] [protein_id=XP_016483088.1] [location=complement(7478..9046)] [gbkey=CDS]
Sequence

ATGGCGGCTTCTTTCATGCTCAGATCTTCTTTCCTCTCTCCTCCTTCTCCCCAACTCCAT
CACCAATCCCCTTCCAAATCTAATCACACTATTCACTTCATCAATCCAATCAAAGCCACC
GCCTCTACAAATGACGCAATTATCCCTCCCCAGAAACATCGTCGCCCCGCCGACGAAAAC
ATCCGCGAAGAGGCGGCGCGCCGGCCCACCTCCTCCCACAATTTCTCCGCCAGGTACGTT
CCTTTCAATGCCGACCCCAGCTCCGACGAATGGTATTCTCTCGATGAAATTATATACCGG
AGCCGCTCCGGTGGCTTACTTGATGTTCAGCATGATATGGACGCTCTGAAGAAATTTGAT
GGCCAGTATTGGCGGTCACTGTTTGATTCACGTGTCGGTAAGACCACGTGGCCGTACGGT
TCAGGCGTTTGGTCTAAAAAGGAATGGGTCCTACCTGAAATCGATAGTGATGATATTGTT
AGTGCTTTTGAAGGAAACTCTAATCTGTTTTGGGCTGAGCGTTTTGGTAAACAGTTTCTA
GGCATGAGTGACTTATGGGTAAAACACTGTGGAATTAGCCATACAGGTAGTTTTAAGGAT
CTGGGTATGACCGTTTTGGTGAGTCAAGTGAACCGGTTAAGGAAAATGCATAAACCGGTT
GTTGGTGTGGGCTGTGCTTCCACTGGTGACACGTCAGCTGCATTGTCAGCTTACTGTGCA
TCTGCGGGGATTCCATCGATTGTATTTTTACCTGCAAATAAGATATCTATGGCGCAGCTG
GTACAACCGATAGCTAACGGAGCTTTTGTGTTGAGCATTGACACCGATTTTGATGGTTGT
ATGCAGTTGATTCGTGAAGTCACTGCTGAGTTGCCAATTTACTTGGCGAATTCTTTGAAT
AGTTTGAGGTTAGAAGGGCAAAAGACTGCAGCAATTGAGATTTTGCAGCAGTTTGATTGG
CAAGTTCCCGATTGGGTGATAGTTCCTGGAGGTAACTTGGGTAATATATATGCGTTCTAT
AAAGGTTTTATGATGTGCAAAGAGTTGGGGCTCGTTGATCGTATCCCTAGGCTTGTGTGT
GCTCAAGCAGCTAACGCTAATCCGCTTTACTTGCATTATAAATCCGGTTGGAAAGACTTT
CAACCCGTGAAGGCGAACACCACATTTGCATCTGCTATACAGATTGGTGACCCAGTGTCT
ATAGATAGAGCTGTTTTTGCCCTGAAGAACTGTGACGGGATAGTGGAGGAGGCAACGGAG
GAGGAGTTGATGGATGCTATGGCTCAGGCAGACTCAACTGGGATGTTCATTTGCCCGCAC
ACTGGTGTGGCATTGACTGCCCTGTTCAAGTTGAGAAACAGTGGAGTTATCGGGCCAAAT
GATAAGACTGTGGTTGTGAGTACAGCACATGGATTGAAGTTTACTCAATCAAAGATTGAT
TACCACTCAAAGGAAATAAAGGACATGGAATGTCGGTTTGCTAACCCACCTGTGGAAGTG
AAAGCAGATTTTGGATCAGTCATGGATGTTCTCAAGAAATATTTGTTGAGCAAAAATGCC
AAGCACTGA

Peptide Sequence

PEP ID

XP_016483088.1
PEP Infomation

PREDICTED: threonine synthase, chloroplastic [Nicotiana tabacum]
Sequence

MAASFMLRSSFLSPPSPQLHHQSPSKSNHTIHFINPIKATASTNDAIIPPQKHRRPADEN
IREEAARRPTSSHNFSARYVPFNADPSSDEWYSLDEIIYRSRSGGLLDVQHDMDALKKFD
GQYWRSLFDSRVGKTTWPYGSGVWSKKEWVLPEIDSDDIVSAFEGNSNLFWAERFGKQFL
GMSDLWVKHCGISHTGSFKDLGMTVLVSQVNRLRKMHKPVVGVGCASTGDTSAALSAYCA
SAGIPSIVFLPANKISMAQLVQPIANGAFVLSIDTDFDGCMQLIREVTAELPIYLANSLN
SLRLEGQKTAAIEILQQFDWQVPDWVIVPGGNLGNIYAFYKGFMMCKELGLVDRIPRLVC
AQAANANPLYLHYKSGWKDFQPVKANTTFASAIQIGDPVSIDRAVFALKNCDGIVEEATE
EELMDAMAQADSTGMFICPHTGVALTALFKLRNSGVIGPNDKTVVVSTAHGLKFTQSKID
YHSKEIKDMECRFANPPVEVKADFGSVMDVLKKYLLSKNAKH

Transcript Sequence

Gene sequence data has not been registered.